toil.test.sort.sortTest
¶
Module Contents¶
Classes¶
Tests Toil by sorting a file in parallel on various combinations of job stores and batch |
Functions¶
|
make sure the output file is deleted every time main is run |
Attributes¶
- toil.test.sort.sortTest.logger¶
- toil.test.sort.sortTest.defaultLineLen¶
- toil.test.sort.sortTest.defaultLines¶
- toil.test.sort.sortTest.defaultN¶
- toil.test.sort.sortTest.runMain(options)¶
make sure the output file is deleted every time main is run
- class toil.test.sort.sortTest.SortTest(methodName='runTest')¶
Bases:
toil.test.ToilTest
,toil.batchSystems.mesos.test.MesosTestSupport
,toil.test.batchSystems.parasolTestSupport.ParasolTestSupport
Tests Toil by sorting a file in parallel on various combinations of job stores and batch systems.
- testNo = 5¶
- setUp()¶
Hook method for setting up the test fixture before exercising it.
- tearDown()¶
Hook method for deconstructing the test fixture after testing it.
- testAwsSingle()¶
- testAwsMesos()¶
- testFileMesos()¶
- testGoogleSingle()¶
- testGoogleMesos()¶
- testFileSingle()¶
- testFileSingleNonCaching()¶
- testFileSingleCheckpoints()¶
- testFileSingle10000()¶
- testFileGridEngine()¶
- testFileTorqueEngine()¶
- testFileParasol()¶
- testSort()¶
- testMerge()¶
- testCopySubRangeOfFile()¶
- testGetMidPoint()¶