Exceptions API¶
Toil specific exceptions.
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exception
toil.job.
JobGraphDeadlockException
(string)[source]¶ An exception raised in the event that a workflow contains an unresolvable dependency, such as a cycle. See
toil.job.Job.checkJobGraphForDeadlocks()
.
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exception
toil.jobStores.abstractJobStore.
ConcurrentFileModificationException
(jobStoreFileID: toil.fileStores.FileID)[source]¶ Indicates that the file was attempted to be modified by multiple processes at once.
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exception
toil.jobStores.abstractJobStore.
JobStoreExistsException
(locator: str)[source]¶ Indicates that the specified job store already exists.
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exception
toil.jobStores.abstractJobStore.
NoSuchFileException
(jobStoreFileID: toil.fileStores.FileID, customName: Optional[str] = None, *extra)[source]¶ Indicates that the specified file does not exist.
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__init__
(jobStoreFileID: toil.fileStores.FileID, customName: Optional[str] = None, *extra)[source]¶ Parameters: - jobStoreFileID – the ID of the file that was mistakenly assumed to exist
- customName – optionally, an alternate name for the nonexistent file
- extra (list) – optional extra information to add to the error message
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