toil.batchSystems

Subpackages

• toil.batchSystems.mesos

Submodules

• toil.batchSystems.abstractBatchSystem
• toil.batchSystems.abstractGridEngineBatchSystem
• toil.batchSystems.awsBatch
• toil.batchSystems.cleanup_support
• toil.batchSystems.contained_executor
• toil.batchSystems.gridengine
• toil.batchSystems.htcondor
• toil.batchSystems.kubernetes
• toil.batchSystems.local_support
• toil.batchSystems.lsf
• toil.batchSystems.lsfHelper
• toil.batchSystems.options
• toil.batchSystems.registry
• toil.batchSystems.singleMachine
• toil.batchSystems.slurm
• toil.batchSystems.torque

Exceptions

DeadlockException

Exception thrown by the Leader or BatchSystem when a deadlock is encountered due to insufficient

Package Contents

exception toil.batchSystems.DeadlockException(msg)

Bases: Exception

Exception thrown by the Leader or BatchSystem when a deadlock is encountered due to insufficient resources to run the workflow

__str__()

Stringify the exception, including the message.