tutorial_cwlexample¶
Module Contents¶
Functions¶
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Attributes¶
- tutorial_cwlexample.initialize_jobs(job)¶
- tutorial_cwlexample.runQC(job, cwl_file, cwl_filename, yml_file, yml_filename, outputs_dir, output_num)¶
Toil
Navigation
Getting Started
Running Toil
- Introduction
- Commandline Options
- Toil Debugging
- Running in the Cloud
- Cloud Platforms
- HPC Environments
- CWL in Toil
- WDL in Toil
- Workflow Execution Service (WES)
Developing Toil Workflows
- Developing a Workflow
- Toil Class API
- Job Store API
- Toil Job API
- Job Methods API
- Job.Runner API
- job.fileStore API
- Batch System API
- Job.Service API
- Exceptions API
Contributing to Toil
Appendices
- Toil Architecture
- Minimum AWS IAM permissions
- Auto-Deployment
- Environment Variables
- API Reference
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