toil.test.batchSystems.test_gridengine

Classes

FakeBatchSystem

Class that implements a minimal Batch System, needed to create a Worker (see below).

GridEngineTest

Class for unit-testing GridEngineBatchSystem

Functions

call_qstat_or_qacct(args, **_)

Module Contents

class toil.test.batchSystems.test_gridengine.FakeBatchSystem[source]

Class that implements a minimal Batch System, needed to create a Worker (see below).

config
getWaitDuration()[source]
with_retries(operation, *args, **kwargs)[source]

The grid engine batch system needs a with_retries function when running the GridEngineThread, so fake one

toil.test.batchSystems.test_gridengine.call_qstat_or_qacct(args, **_)[source]
class toil.test.batchSystems.test_gridengine.GridEngineTest(methodName='runTest')[source]

Bases: toil.test.ToilTest

Class for unit-testing GridEngineBatchSystem

setUp()[source]

Hook method for setting up the test fixture before exercising it.

test_coalesce_job_exit_codes_one_exists()[source]
test_coalesce_job_exit_codes_one_still_running()[source]
test_coalesce_job_exit_codes_many_all_exist()[source]