API Reference¶
This page contains auto-generated API reference documentation 1.
toil
toil.batchSystems
toil.batchSystems.mesos
toil.batchSystems.abstractBatchSystem
toil.batchSystems.abstractGridEngineBatchSystem
toil.batchSystems.awsBatch
toil.batchSystems.cleanup_support
toil.batchSystems.contained_executor
toil.batchSystems.gridengine
toil.batchSystems.htcondor
toil.batchSystems.kubernetes
toil.batchSystems.local_support
toil.batchSystems.lsf
toil.batchSystems.lsfHelper
toil.batchSystems.options
toil.batchSystems.parasol
toil.batchSystems.registry
toil.batchSystems.singleMachine
toil.batchSystems.slurm
toil.batchSystems.tes
toil.batchSystems.torque
toil.cwl
toil.fileStores
toil.jobStores
toil.lib
toil.lib.aws
toil.lib.encryption
toil.lib.accelerators
toil.lib.bioio
toil.lib.compatibility
toil.lib.conversions
toil.lib.docker
toil.lib.ec2
toil.lib.ec2nodes
toil.lib.exceptions
toil.lib.expando
toil.lib.generatedEC2Lists
toil.lib.humanize
toil.lib.io
toil.lib.iterables
toil.lib.memoize
toil.lib.misc
toil.lib.objects
toil.lib.resources
toil.lib.retry
toil.lib.threading
toil.lib.throttle
toil.provisioners
toil.server
toil.test
toil.test.batchSystems
toil.test.cwl
toil.test.docs
toil.test.jobStores
toil.test.lib
toil.test.mesos
toil.test.provisioners
toil.test.server
toil.test.sort
toil.test.src
toil.test.src.autoDeploymentTest
toil.test.src.busTest
toil.test.src.checkpointTest
toil.test.src.deferredFunctionTest
toil.test.src.dockerCheckTest
toil.test.src.fileStoreTest
toil.test.src.helloWorldTest
toil.test.src.importExportFileTest
toil.test.src.jobDescriptionTest
toil.test.src.jobEncapsulationTest
toil.test.src.jobFileStoreTest
toil.test.src.jobServiceTest
toil.test.src.jobTest
toil.test.src.miscTests
toil.test.src.promisedRequirementTest
toil.test.src.promisesTest
toil.test.src.realtimeLoggerTest
toil.test.src.regularLogTest
toil.test.src.resourceTest
toil.test.src.restartDAGTest
toil.test.src.resumabilityTest
toil.test.src.retainTempDirTest
toil.test.src.systemTest
toil.test.src.threadingTest
toil.test.src.toilContextManagerTest
toil.test.src.userDefinedJobArgTypeTest
toil.test.src.workerTest
toil.test.utils
toil.test.wdl
toil.utils
toil.utils.toilClean
toil.utils.toilDebugFile
toil.utils.toilDebugJob
toil.utils.toilDestroyCluster
toil.utils.toilKill
toil.utils.toilLaunchCluster
toil.utils.toilMain
toil.utils.toilRsyncCluster
toil.utils.toilServer
toil.utils.toilSshCluster
toil.utils.toilStats
toil.utils.toilStatus
toil.utils.toilUpdateEC2Instances
toil.wdl
toil.bus
toil.common
toil.deferred
toil.exceptions
toil.job
toil.leader
toil.realtimeLogger
toil.resource
toil.serviceManager
toil.statsAndLogging
toil.toilState
toil.version
toil.worker
fake_mpi_run
debugWorkflow
mkFile
example_cachingbenchmark
tutorial_requirements
tutorial_invokeworkflow
tutorial_arguments
tutorial_helloworld
tutorial_encapsulation
tutorial_invokeworkflow2
tutorial_promises
example_alwaysfail
tutorial_multiplejobs3
tutorial_encapsulation2
tutorial_jobfunctions
tutorial_staging
tutorial_docker
tutorial_dynamic
tutorial_managing2
tutorial_managing
tutorial_cwlexample
tutorial_quickstart
tutorial_discoverfiles
tutorial_multiplejobs
tutorial_services
tutorial_promises2
tutorial_multiplejobs2
- 1
Created with sphinx-autoapi