toil.test.src.resumabilityTest

Module Contents

Classes

ResumabilityTest

https://github.com/BD2KGenomics/toil/issues/808

Functions

parent(job)	Set up a bunch of dummy child jobs, and a bad job that needs to be
chaining_parent(job)	Set up a failing job to chain to.
goodChild(job)	Does nothing.
badChild(job)	Fails the first time it's run, succeeds the second time.

class toil.test.src.resumabilityTest.ResumabilityTest(methodName='runTest')

Bases: toil.test.ToilTest

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https://github.com/BD2KGenomics/toil/issues/808

test()

Tests that a toil workflow that fails once can be resumed without a NoSuchJobException.

test_chaining()

Tests that a job which is chained to and fails can resume and succeed.

toil.test.src.resumabilityTest.parent(job)

Set up a bunch of dummy child jobs, and a bad job that needs to be restarted as the follow on.

toil.test.src.resumabilityTest.chaining_parent(job)

Set up a failing job to chain to.

toil.test.src.resumabilityTest.goodChild(job)

Does nothing.

toil.test.src.resumabilityTest.badChild(job)

Fails the first time it’s run, succeeds the second time.