toil.test.src.jobFileStoreTest¶
Attributes¶
Classes¶
Tests testing the methods defined in :class:toil.fileStores.abstractFileStore.AbstractFileStore. |
Functions¶
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Test job exercises toil.fileStores.abstractFileStore.AbstractFileStore functions |
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Module Contents¶
- toil.test.src.jobFileStoreTest.logger¶
- toil.test.src.jobFileStoreTest.PREFIX_LENGTH = 200¶
- class toil.test.src.jobFileStoreTest.JobFileStoreTest(methodName='runTest')¶
Bases:
toil.test.ToilTest
Tests testing the methods defined in :class:toil.fileStores.abstractFileStore.AbstractFileStore.
- testCachingFileStore()¶
- testNonCachingFileStore()¶
- testJobFileStore()¶
Tests case that about half the files are cached
- testJobFileStoreWithBadWorker()¶
Tests case that about half the files are cached and the worker is randomly failing.
- toil.test.src.jobFileStoreTest.fileTestJob(job, inputFileStoreIDs, testStrings, chainLength)¶
Test job exercises toil.fileStores.abstractFileStore.AbstractFileStore functions
- toil.test.src.jobFileStoreTest.fileStoreString = 'Testing writeGlobalFile'¶
- toil.test.src.jobFileStoreTest.streamingFileStoreString = 'Testing writeGlobalFileStream'¶
- toil.test.src.jobFileStoreTest.simpleFileStoreJob(job)¶
- toil.test.src.jobFileStoreTest.fileStoreChild(job, testID1, testID2)¶